Bose-Einstein-Kondensat

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] Jun 16, 2024 at 08:42 UTC

4/n Despite its massive #educational potential, to my point of view it currently also represents the best price for value platform for serious #research purposes, e.g. fantastic #Alphafold model #visualization & even #DrugDesign. #DIYbio #lab #instruments #chemistry #education #AR #STEM #MINT

0 replies 1 reposts 1 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] Jun 16, 2024 at 08:13 UTC

3/n Originally designed as an #AR board #gaming platform we instantly realized the potential of the marvelous @tiltfive hardware hardware & implemented a hack to use it for #STEM purposes.
#DIYbio #lab #instruments #OpenSource #chemistry #MINT #school #education #AugmentedReality

0 replies 1 reposts 1 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] Jun 15, 2024 at 13:46 UTC

2/n ...incl. a few impressions from our presentation booth - plus a delegation from the German parliament. #DIYbio #lab #instruments #OpenSource #chemistry #bioinformatics #CompChem #AugmentedReality

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Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] Jun 15, 2024 at 13:35 UTC

1/n Proud to present the first #prototype of our Rechenkraft.net Molecular #AR Environment at this year's #IdeenExpo (8th-16th June/#Hannover): An #OpenSource system based on the @tiltfive hardware to visualize #molecular structures in #3D.
#DIYbio #lab #instruments #chem #bioinformatics #CompChem

3 replies 4 reposts 4 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] Jun 06, 2024 at 10:44 UTC

#bIUreactor: A modular #OpenSource 3D tissue #research platform:

-perfusible #3Dtissues
-#tissue culture #bioreactor chamber
-cyclic compression module
-#PET-compatible

doi.org/10.1007/s104...
#DIYbio #lab #instruments #biofabrication #bioprinting #3Dprinting #spheroid #Arduino #science

0 replies 0 reposts 2 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] Jun 06, 2024 at 10:17 UTC

#SaprotHub: Making #protein #modeling accessible to all biologists:

-create & train own #DeepLearning models without the need for advanced #MachineLearning & coding expertise

doi.org/10.1101/2024...
#DIYbio #bioinformatics #CompChem #AI #ML #KI #LLM #AF2 #ESMfold #ColabFold #sciece #research

0 replies 0 reposts 0 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] Jun 06, 2024 at 09:40 UTC

An #OpenSource, high resolution, #automated #fluorescence #microscope:

-reaches single molecule sensitivity
-single particle tracking & #SMLM super-resolution #microscopy experiments in cells

doi.org/10.7554/eLif...
#DIYbio #lab #instruments #optics #imaging #science #research

0 replies 0 reposts 0 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] Jun 05, 2024 at 21:56 UTC

#NMRduino: A modular #Arduino-based #OpenSource low-field #magnetic #resonance platform:

Paper: doi.org/10.1016/j.jm...
YouTube: youtu.be/J0H-56QSqVw
#DIYbio #DIYchem #chemistry #lab #instruments #NMR #spectroscopy #analytics

0 replies 0 reposts 1 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] Jun 04, 2024 at 09:30 UTC

An #OpenSource alignment method for multichannel infinite-conjugate microscopes using a ray transfer matrix analysis model:

-uses the #M4All & #OpenFlexure #3Dprintable #microscope for validation

doi.org/10.1098/rsta...
#DIYbio #lab #instruments #microscopy #imaging #Jupyter #science #research

0 replies 0 reposts 1 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] Jun 04, 2024 at 09:13 UTC

#M4All: A low-cost #OpenSource, #3Dprintable and modular microscopy system based on #RaspberryPi components: magpi.raspberrypi.com/articles/m4a... #DIYbio #hackerspace #biohacking #microscope #imaging #raspi #MINT #STEM

0 replies 0 reposts 0 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] Jun 04, 2024 at 08:58 UTC

#OpenCell: A $50 #OpenSource 3-in-1 device for #DNA #extraction:

-combines bead #homogenizer, #microcentrifuge & vortex #mixer
-RPM measurement
-programmable timers
-battery operation
-optional speed control

doi.org/10.1371/jour...
#DIYbio #lab #instruments #FrugalScience #science #research

0 replies 0 reposts 0 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] Jun 03, 2024 at 11:06 UTC

DRGN-AI: Revealing #biomolecular structure & motion with #OpenSource neural ab initio #cryoEM reconstruction:
doi.org/10.1101/2024...
#DIYbio #chemistry #lab #instruments #microscopy #EM #imaging #science #research

0 replies 0 reposts 0 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] Jun 02, 2024 at 20:55 UTC

#Japan’s push to make all #research #OpenAccess is taking shape:
www.nature.com/articles/d41...

0 replies 0 reposts 0 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] Jun 01, 2024 at 15:10 UTC

ABI EIT: A wearable #OpenSource electrical #impedance #tomography (#EIT) device:

-#medical #imaging
-monitoring #lung/#cardiac function, #brain activity
-cost: ~US$260
-#3Dprinted parts
-#Teensy controller

doi.org/10.1016/j.oh...
#DIYbio #lab #instruments #medicine #diagnostics

0 replies 0 reposts 0 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] May 31, 2024 at 14:18 UTC

#OpenSource mod of a desktop #FFF printer via 980 nm #NIR #laser addition for upconversion #3Dprinting:

-penetration depths up to 5.8 cm
-printing inside/through existing #3Dprinted parts
-in situ #bioprinting

doi.org/10.1016/j.oh...
#stereolithography #DIYbio #lab #instruments

0 replies 0 reposts 2 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] May 30, 2024 at 14:44 UTC

#OpenSource #strobe-enhanced #microscopy stage:

-workstation for sharp #imaging of fast processes
-developed for #microfluidic #droplet generation
-#PiCam lens: FoV ~1mm
-#LED strobe #illumination

Web: wenzel-lab.github.io/strobe-enhan...
#DIYbio #lab #instruments #microscope #microfluidics

0 replies 0 reposts 0 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] May 30, 2024 at 14:31 UTC

Two related web ressources:
1) freddiehong.com/2023/07/03/5...
2) freddiehong.com/2022/02/28/o...
#3Dprinting

0 replies 0 reposts 0 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] May 29, 2024 at 12:14 UTC

#Open5x: #OpenSource 5-axis multi-material #3Dprinting of curved electrical traces:

-uses #Ender3D #3Dprinter
-uses carbon- (#ProtoPasta) & copper-based PLA (#Electrifi)

Paper: doi.org/10.1016/j.ad...
GitHub: github.com/FreddieHong1...
#DIYbio #DIYtech #lab #instruments #3Dprinted

1 replies 0 reposts 0 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] May 29, 2024 at 10:22 UTC

#Magnetic resonance #imaging: #OpenAccess software tools for the #NMR/#MRI community:
ismrm.github.io/mrhub/
#DIYbio #lab #instruments #chemistry #DIYchem #OpenSource #MRT #diagnostics #analytics #medicine

0 replies 0 reposts 0 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] May 28, 2024 at 13:51 UTC

Nice up to date #review on #OpenSource #magnetic #resonance #imaging: Improving access, #science & #education through global #collaboration:

-covers hard-/software

doi.org/10.1002/nbm....
#DIYbio #DIYchem #lab #instruments #chemistry #analytics #diagnostics #MRI #MRT #medicine #OpenAccess

0 replies 0 reposts 0 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] May 27, 2024 at 15:10 UTC

The #OSI² ONE #OpenSource #MRI #scanner:

Press: www.ptb.de/cms/presseak...
Web: www.opensourceimaging.org
GitLab: gitlab.com/osii
Build workshop movie: www.youtube.com/watch?v=1q0d...
Workshop slides: zenodo.org/records/1007...
#DIYbio #DIYchem #chemistry #lab #instruments #analytics #MRT #medicine

0 replies 1 reposts 2 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] May 27, 2024 at 14:36 UTC

...now published in HardwareX:
doi.org/10.1016/j.oh...
#DIYbio #lab #instruments #imaging #microscopy

0 replies 0 reposts 0 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] May 26, 2024 at 15:17 UTC

#EnduroBone: A #3Dprinted, affordable #OpenSource #bioreactor for extended #bone #tissue #culture:

-#Arduino-control
-long-term tissue viability up to 28 days

doi.org/10.1016/j.oh...
#DIYbio #lab #instruments

0 replies 0 reposts 1 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] May 26, 2024 at 14:48 UTC

Optical #fiber-based #OpenSource & low cost portable #spectrometer system:

-#RaspberryPi-/#Python-controlled
-#3Dprinted parts

doi.org/10.1016/j.oh...
#DIYbio #DIYchem #chemistry #lab #instruments #fluorescence #absorption #LED

0 replies 0 reposts 0 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] May 25, 2024 at 13:53 UTC

#MOS3S: #Microfluidic-assisted #OpenSource #3Dbioprinting system for the engineering of hierarchical #tissues:

-#3dprinted parts
-#syringe #pumps
-fabrication of cm scale lattice constructs

doi.org/10.1016/j.oh...
#DIYbio #lab #instruments #hydrogel #bioprinter #tissue

0 replies 0 reposts 1 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] May 25, 2024 at 13:22 UTC

#BioCloneBot: A versatile, low-cost & #OpenSource #automated #liquid handler:

-#3Dprinted parts

Tested with:
-#restriction #enzyme #digest & #ligation
-#GoldenGate & #Gibson assembly

doi.org/10.1016/j.oh...
#DIYbio #lab #instruments #SynBio

0 replies 0 reposts 0 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] Mar 10, 2024 at 15:49 UTC

#Ystruder: #OpenSource multifunction #extruder with #sensing & #monitoring capabilities:

-#RaspberryPi-based #wireless control
-cost: ~$150

doi.org/10.1016/j.oh...
#DIYbio #lab #instruments #syringe #pump #3Dprinting #Teensy #ESP32 #Python

0 replies 0 reposts 2 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] Mar 10, 2024 at 15:38 UTC

#KATARA: #OpenSource controller (~$200) for #microfluidic large-scale integration:

-up to 70 #solenoid valves
-#Arduino-/#Python-/#GUI-control

doi.org/10.1016/j.oh...
#DIYbio #lab #instruments #microfluidics

0 replies 0 reposts 0 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] Mar 10, 2024 at 15:19 UTC

CZ ID: An #OpenSource cloud-based, no-code platform enabling advanced long read #metagenomic #analysis:

Preprint: doi.org/10.1101/2024...
Web: czid.org
GitHub: github.com/chanzuckerbe...

#DIYbio #lab #instruments #bioinformatics #NGS #genomics #Kraken2 #microbiome

0 replies 0 reposts 0 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] Mar 08, 2024 at 12:21 UTC

Pi-seq: A customizable #OpenSource #multichannel #syringe #pump for #microfluidics:

-no backflow
-#RaspberryPi/#Python-control
-#3Dprinted parts
-cost < 600€
-#Peltier temp. control
-integration in #droplet #scRNAseq

doi.org/10.1016/j.oh...
#DIYbio #lab #instruments #fluidics

0 replies 0 reposts 1 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] Mar 08, 2024 at 12:08 UTC

#PatternJ: An #ImageJ #OpenSource toolset for the #automated & quantitative #analysis of regular spatial #patterns found in #cells & #tissue:

-video #tutorial available

doi.org/10.1101/2024...
#DIYbio #lab #instruments #imaging #Fiji #biology #microscopy #bioinformatics

0 replies 0 reposts 0 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] Mar 08, 2024 at 11:52 UTC

#GlycoSHIELD: #OpenSource tool to graft #glycan #conformer arrays on a #protein #structure:

-speeds up #drug dev.
-#cryoEM consistent

Paper: doi.org/10.1016/j.ce...
App: dioscuri-biophysics.pages.mpcdf.de/glycoshield-...
GitHub: github.com/GlycoSHIELD-...

#DIYbio #lab #CompChem #bioinformatics

0 replies 0 reposts 0 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] Mar 08, 2024 at 11:21 UTC

Add-on:
phys.org/news/2024-03...

opensim.notion.site/openSIM-e027...

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Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] Mar 04, 2024 at 13:58 UTC

Using the #VideoGame engine #UnrealEngine 5 to render #protein #structures from #CryoET inside #cells at the #atomic level:

Preprint: doi.org/10.1101/2023...
Tutorial: blake.bcm.edu/emanwiki/EMA...

#SciArt #CompChem #bioinformatics #EMAN2 #UE5 #DIYbio #education #MINT #STEM #SciComm

0 replies 0 reposts 0 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] Mar 01, 2024 at 14:06 UTC

FAR-Pi: #OpenSource #AugmentedReality #goggles for #fluorescence-guided #surgery:

-coupled with novel near #infrared (#NIR) #fluorescent contrast agents
-#RaspPi-/#PiCam-control

doi.org/10.1101/2022...
#DIYbio #lab #3Dprinted #instruments #laser #LED #medicine #imaging #AR

0 replies 0 reposts 0 likes

Bose-Einstein-Kondensat @mwnautilus.bsky.social [ View ] Feb 28, 2024 at 14:41 UTC

#3Dprinted #mass #spectrometer filters: Lighter, cheaper & just as precise:

-low-cost, compact #quadrupole mass filters: #QMFs
-via ceramic resin vat #photopolymerization

doi.org/10.1002/advs...
#DIYbio #DIYchem #lab #instruments #chemistry #analytics #MS #MassSpectrometry #QMF

0 replies 0 reposts 0 likes